Installing gTranslate

IN PROGRESS

gTranslate is available through multiple sources, you only need to choose one. If you are unsure which one to choose, Bioconda is generally the easiest.

Sources

Bioconda
pip

Hardware requirements

Python libraries

gTranslate is designed for Python >=3.12 and requires the following libraries, which will be automatically installed:

Please cite these libraries if you use gTranslate in your work.

Third-party software

gTranslate makes use of the following 3rd party dependencies and assumes they are on your system path:

Tip

The check_install command will verify that all of the programs are on the path.

Software	Version	Reference
Prodigal	>= 2.6.2	Hyatt D, et al. 2010. Prodigal: prokaryotic gene recognition and translation initiation site identification. BMC Bioinformatics, 11:119. doi: 10.1186/1471-2105-11-119.

Please cite these tools if you use gTranslate in your work.

gTranslate models

Currently , gTranslate models are provided as part of gTranslate package.