Bioconda

Step 1: Install conda (if not already done)

We strongly recommend using Mamba (much faster!) over miniconda/conda, but all will work.

Step 2: Create the gTranslate environment

It is strongly recommended to create a new conda environment for each version of gTranslate released.

gTranslate requires third-party packages from the conda-forge and bioconda channels, make sure to specify those channels in that order!

# NOTE: replace 0.0.3 with the version you wish to install

# using conda
conda create -n gtranslate-0.0.3 -c conda-forge -c bioconda gtdb-gtranslate=0.0.3

# using mamba (alternative)
mamba create -n gtranslate-0.0.3 -c conda-forge -c bioconda gtdb-gtranslate=0.0.3